DNA Binding Motif

						

			
Accessions: M0700 (AthalianaCistrome v4_May2016)

			
Names: CUC3.ampDAP, T05457;
Organisms: Arabidopsis thaliana
Libraries: AthalianaCistrome v4_May2016 1
1 O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). [Pubmed]
Length: 16
Consensus: CkTGtwhywCACGywA
Weblogo: 
PSSM: P0      A      C      G      T
01     13    545      0      3      C
02      3      0    268    290      k
03      0      0      4    557      T
04     85     76    392      8      G
05     94     68     22    377      t
06    150     95    126    190      w
07    141    181     88    151      h
08    111    169     69    212      y
09    276     33     93    159      w
10      7    412     11    131      C
11    561      0      0      0      A
12    120    441      0      0      C
13      8      0    531     22      G
14     33    209     64    255      y
15    181    130      7    243      w
16    443      4      5    109      A
Binding TFs: T05457 (No apical meristem (NAM) protein)
			
Publications: O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.