DNA Binding Motif

						

			
Accessions: NEUROG1_methyl_3 (HT-SELEX2 May2017)

			
Names: NEUROG1
Organisms: Homo sapiens
Libraries: HT-SELEX2 May2017 1
1 Yin Y, Morgunova E, Jolma A, Kaasinen E, Sahu B, Khund-Sayeed S, Das PK, Kivioja T, Dave K, Zhong F, Nitta KR, Taipale M, Popov A, Ginno PA, Domcke S, Yan J, Schübeler D, Vinson C, Taipale J. Impact of cytosine methylation on DNA binding specificities of human transcription factors. Science : (2017). [Pubmed]
Length: 10
Consensus: rrCATATGty
Weblogo: 
PSSM: P0      A      C      G      T
01   2752    244   2563     82      r
02   2852   1106   1343     14      r
03      0   5315     21     17      C
04   5315      0      0     34      A
05      0     71     78   5315      T
06   5315     39     75      0      A
07     24     11     21   5315      T
08      0     13   5315     23      G
09     10   1237   1144   2925      t
10     99   2621    258   2694      y
Binding TFs: NEUROG1 (Helix-loop-helix DNA-binding domain)
			
Publications: Yin Y, Morgunova E, Jolma A, Kaasinen E, Sahu B, Khund-Sayeed S, Das PK, Kivioja T, Dave K, Zhong F, Nitta KR, Taipale M, Popov A, Ginno PA, Domcke S, Yan J, Schübeler D, Vinson C, Taipale J. Impact of cytosine methylation on DNA binding specificities of human transcription factors. Science : (2017). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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