DNA Binding Motif

						

			
Accessions: ONECUT2_methyl_4 (HT-SELEX2 May2017)

			
Names: ONECUT2
Organisms: Homo sapiens
Libraries: HT-SELEX2 May2017 1
1 Yin Y, Morgunova E, Jolma A, Kaasinen E, Sahu B, Khund-Sayeed S, Das PK, Kivioja T, Dave K, Zhong F, Nitta KR, Taipale M, Popov A, Ginno PA, Domcke S, Yan J, Schübeler D, Vinson C, Taipale J. Impact of cytosine methylation on DNA binding specificities of human transcription factors. Science : (2017). [Pubmed]
Length: 12
Consensus: kTATTGATCsGT
Weblogo: 
PSSM: P0      A      C      G      T
01    211     23    741   1364      k
02      0      0      0   2339      T
03   2339      0      0      0      A
04      0      0      0   2339      T
05      0    578      0   2339      T
06      0      0   2339      0      G
07   2339      0      0      0      A
08      0      0      0   2339      T
09      0   2339      0      0      C
10      0   2339   1114    461      s
11    678      0   2339      0      G
12    139    365      0   2339      T
Binding TFs: ONECUT2 (Homeobox domain, CUT domain)
			
Publications: Yin Y, Morgunova E, Jolma A, Kaasinen E, Sahu B, Khund-Sayeed S, Das PK, Kivioja T, Dave K, Zhong F, Nitta KR, Taipale M, Popov A, Ginno PA, Domcke S, Yan J, Schübeler D, Vinson C, Taipale J. Impact of cytosine methylation on DNA binding specificities of human transcription factors. Science : (2017). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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