DNA Binding Motif

						

			
Accessions: UN0431.1 (JASPAR 2024)

			
Names: bHLH172
Organisms: Zea mays
Libraries: JASPAR 2024 1
1 Rauluseviciute I, Riudavets-Puig R, Blanc-Mathieu R, Castro-Mondragon JA, Ferenc K, Kumar V, Lemma RB, Lucas J, Cheneby J, Baranasic D, Khan A, Fornes O, Gundersen S, Johansen M, Hovig E, Lenhard B, Sandelin A, Wasserman WW, Parcy F, Mathelier A. JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2023). [Pubmed]
Notes: ChIP-seq
Length: 10
Consensus: vcGCACGCrs
Weblogo: 
PSSM: P0      A      C      G      T
01   1263   1217   1242    582      v
02    629   1708    990    977      c
03      0      0   4304      0      G
04      0   4304      0      0      C
05   4304      0      0      0      A
06      0   4304      0      0      C
07      0      0   4304      0      G
08      0   4304      0      0      C
09   1428    876   1512    488      r
10    663   1791   1118    732      s
Type: Heterodimer
Binding TFs: B4FRK4 (Helix-loop-helix DNA-binding domain)
B4FRK4
Binding Sites: UN0431.1.1
UN0431.1.10 / UN0431.1.16 / UN0431.1.17
UN0431.1.11
UN0431.1.12 / UN0431.1.2
UN0431.1.13
UN0431.1.14
UN0431.1.15
UN0431.1.18
UN0431.1.19 / UN0431.1.8
UN0431.1.20
UN0431.1.3
UN0431.1.4
UN0431.1.5
UN0431.1.6
UN0431.1.7
UN0431.1.9
			
	
			


			

				

				
				
				
				

			

			

		

	
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