DNA Binding Motif
| Accessions: | MA2415.1 (JASPAR 2024) |
| Names: | EREB138 |
| Organisms: | Zea mays |
| Libraries: | JASPAR 2024 1 1 Rauluseviciute I, Riudavets-Puig R, Blanc-Mathieu R, Castro-Mondragon JA, Ferenc K, Kumar V, Lemma RB, Lucas J, Cheneby J, Baranasic D, Khan A, Fornes O, Gundersen S, Johansen M, Hovig E, Lenhard B, Sandelin A, Wasserman WW, Parcy F, Mathelier A. JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2023). [Pubmed] |
| Notes: | DAP-seq |
| Length: | 10 |
| Consensus: | cmGCCGCCAT |
| Weblogo: |  |
| PSSM: | P0 A C G T 01 718 3513 1178 947 c 02 3337 2127 539 353 m 03 114 183 5958 101 G 04 77 6069 134 76 C 05 186 5826 242 102 C 06 189 156 5888 123 G 07 57 6075 128 96 C 08 78 6124 99 55 C 09 5531 154 588 83 A 10 193 446 357 5360 T |
| Binding TFs: | A0A060D2G6 |
| Binding Sites: | MA2415.1.1 / MA2415.1.19 MA2415.1.2 MA2415.1.10 / MA2415.1.9 MA2415.1.11 / MA2415.1.4 / MA2415.1.7 / MA2415.1.8 MA2415.1.12 MA2415.1.13 MA2415.1.14 MA2415.1.15 MA2415.1.16 MA2415.1.17 MA2415.1.18 MA2415.1.20 MA2415.1.3 MA2415.1.5 MA2415.1.6 |
| Publications: | Hao D., Ohme-Takagi M., Sarai A. Unique mode of GCC box recognition by the DNA-binding domain of ethylene-responsive element-binding factor (ERF domain) in plant. J. Biol. Chem. 273:26857-26861 (1998). [Pubmed] |
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These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.