DNA Binding Motif

						

			
Accessions: TaNAC69(2) (Athamap 20091028)

			
Names: TaNAC69(2)
Organisms: Triticum aestivum
Libraries: Athamap 20091028 1
1 Bulow L, Engelmann S, Schindler M, Hehl R. AthaMap, integrating transcriptional and post-transcriptional data. Nucleic acids research 37:D983-6 (2009).  [Pubmed]
Length: 24
Consensus: rgTskTtawcytttryACGtmwCT
Weblogo: 
PSSM: P0      A      C      G      T
01      5      0      4      0      r
02      2      2      5      0      g
03      2      0      0      7      T
04      2      3      3      1      s
05      1      0      4      4      k
06      0      1      1      7      T
07      1      2      1      5      t
08      4      1      2      2      a
09      3      1      2      3      w
10      2      4      2      1      c
11      0      4      2      3      y
12      1      1      1      6      t
13      1      1      2      5      t
14      2      1      1      5      t
15      3      1      3      2      r
16      0      5      0      4      y
17      9      0      0      0      A
18      0      9      0      0      C
19      0      0      9      0      G
20      0      2      1      6      t
21      3      5      0      1      m
22      6      0      0      3      w
23      0      7      0      2      C
24      0      2      0      7      T
Binding TFs: TaNAC69 (No apical meristem (NAM) protein)
			
Publications: Xue GP, Bower NI, McIntyre CL, Riding GA, Kazan K, Shorter R  2006. TaNAC69 from the NAC superfamily of transcription factors is up-regulated by abiotic stresses in wheat and recognises two consensus DNA-binding sequences Funct Plant Biol 33: 43-57.

	
			


			

				

				
				
				
				

			

			

		

	
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These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.