DNA Binding Motif

Accessions: MA0868.3 (JASPAR 2024)
Names: SOX8
Organisms: Homo sapiens
Libraries: JASPAR 2024 1
1 Rauluseviciute I, Riudavets-Puig R, Blanc-Mathieu R, Castro-Mondragon JA, Ferenc K, Kumar V, Lemma RB, Lucas J, Cheneby J, Baranasic D, Khan A, Fornes O, Gundersen S, Johansen M, Hovig E, Lenhard B, Sandelin A, Wasserman WW, Parcy F, Mathelier A. JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2023). [Pubmed]
Notes: HT-SELEX
Length: 7
Consensus: AACAATr
Weblogo:
PSSM: P0 A C G T
01 1827 151 263 222 A
02 1827 0 0 45 A
03 3 1827 35 70 C
04 1827 0 0 16 A
05 1827 43 0 36 A
06 273 36 20 1827 T
07 1356 208 1827 287 r
Type: Heterodimer
Binding TFs: P57073 (HMG (high mobility group) box, Domain of unknown function (DUF1898), Sox developmental protein N terminal )
P57073
Publications: Stros M, Launholt D, Grasser KD. The HMG-box: a versatile protein domain occurring in a wide variety of DNA-binding proteins. Cell Mol Life Sci : (2007). [Pubmed]

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