DNA Binding Motif

						

			
Accessions: MA0867.3 (JASPAR 2024)

			
Names: SOX4
Organisms: Homo sapiens, Mus musculus
Libraries: JASPAR 2024 1
1 Rauluseviciute I, Riudavets-Puig R, Blanc-Mathieu R, Castro-Mondragon JA, Ferenc K, Kumar V, Lemma RB, Lucas J, Cheneby J, Baranasic D, Khan A, Fornes O, Gundersen S, Johansen M, Hovig E, Lenhard B, Sandelin A, Wasserman WW, Parcy F, Mathelier A. JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2023). [Pubmed]
Notes: HT-SELEX
Length: 8
Consensus: aACAAwGr
Weblogo: 
PSSM: P0      A      C      G      T
01   5582    951   2047    431      a
02   5582      0      0      9      A
03      0   5582     37     33      C
04   5582      1      6      0      A
05   5582      6     11      0      A
06   5582    120     50   2719      w
07   1018     64   5582     83      G
08   2093   1422   3489    174      r
Type: Heterodimer
Binding TFs: Q06945 (HMG (high mobility group) box, Domain of unknown function (DUF1898))
Q06945
			
Publications: Stros M, Launholt D, Grasser KD. The HMG-box: a versatile protein domain occurring in a wide variety of DNA-binding proteins. Cell Mol Life Sci : (2007). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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