DNA Binding Motif

						

			
Accessions: MA0347.1 (JASPAR 2024)

			
Names: NRG1
Organisms: Saccharomyces cerevisiae
Libraries: JASPAR 2024 1
1 Rauluseviciute I, Riudavets-Puig R, Blanc-Mathieu R, Castro-Mondragon JA, Ferenc K, Kumar V, Lemma RB, Lucas J, Cheneby J, Baranasic D, Khan A, Fornes O, Gundersen S, Johansen M, Hovig E, Lenhard B, Sandelin A, Wasserman WW, Parcy F, Mathelier A. JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2023). [Pubmed]
Notes: PBM
Length: 20
Consensus: ytvrrymAGGGTCCwtbgcw
Weblogo: 
PSSM: P0      A      C      G      T
01    181    404    143    271      y
02    243    225    199    332      t
03    293    250    278    177      v
04    259    239    262    238      r
05    419    112    269    198      r
06    213    255     92    439      y
07    455    488      9     46      m
08    960      3     36      0      A
09      2      1    991      4      G
10      2      1    993      2      G
11     11      0    986      1      G
12     71     11      2    915      T
13      4    928      2     63      C
14      3    820      3    173      C
15    503     87     39    369      w
16    245    202    239    311      t
17    124    303    269    302      b
18    224     67    548    159      g
19    206    400    228    163      c
20    325    171    233    269      w
Type: Heterodimer
Binding TFs: Q03125 (Zinc finger, C2H2 type, Zinc-finger double domain, C2H2-type zinc finger)
Q03125
			
Publications: Newburger D.E, Bulyk M.L. UniPROBE: an online database of protein binding microarray data on protein-DNA interactions. Nucleic acids research 37:D77-82 (2009). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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