DNA Binding Motif

						

			
Accessions: HSF2_methyl_3 (HT-SELEX2 May2017)

			
Names: HSF2
Organisms: Homo sapiens
Libraries: HT-SELEX2 May2017 1
1 Yin Y, Morgunova E, Jolma A, Kaasinen E, Sahu B, Khund-Sayeed S, Das PK, Kivioja T, Dave K, Zhong F, Nitta KR, Taipale M, Popov A, Ginno PA, Domcke S, Yan J, Schübeler D, Vinson C, Taipale J. Impact of cytosine methylation on DNA binding specificities of human transcription factors. Science : (2017). [Pubmed]
Length: 15
Consensus: rGAAbgTTCyrGAag
Weblogo: 
PSSM: P0      A      C      G      T
01  10416     18  17166    791      r
02     48     44  28391    101      G
03  28391    232      0    795      A
04  28391    350    862   4171      A
05   3362   9582   7743   7705      b
06   6151   4458  14542   3240      g
07   5299   1398    841  28391      T
08   3907    227   7321  28391      T
09    138  28391    127    182      C
10    101  13760      0  14631      y
11  11552      0  16839    338      r
12    494   1039  28391   1001      G
13  28391   5445   2108   4735      A
14  28391   3049   5739   8779      a
15   5594   6747   9986   6064      g
Binding TFs: HSF2 (HSF-type DNA-binding)
			
Publications: Yin Y, Morgunova E, Jolma A, Kaasinen E, Sahu B, Khund-Sayeed S, Das PK, Kivioja T, Dave K, Zhong F, Nitta KR, Taipale M, Popov A, Ginno PA, Domcke S, Yan J, Schübeler D, Vinson C, Taipale J. Impact of cytosine methylation on DNA binding specificities of human transcription factors. Science : (2017). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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