DNA Binding Motif

						

			
Accessions: TF65_MOUSE.H10MO.C|M01385 (HOCOMOCO 10)

			
Names: Rela
Organisms: Mus musculus
Libraries: HOCOMOCO 10 1
1 Kulakovskiy IV, Vorontsov IE, Yevshin IS, Soboleva AV, Kasianov AS, Ashoor H, Ba-Alawi W, Bajic VB, Medvedeva YA, Kolpakov FA, Makeev VJ. HOCOMOCO: expansion and enhancement of the collection of transcription factor binding sites models. Nucleic Acids Res : (2016). [Pubmed]
Notes: NF-kappaB-related factors{6.1.1}; NF-kappaB p65 subunit-like factors{6.1.1.2}
Length: 22
Consensus: GGrawttCCmwdmTtkckhmay
Weblogo: 
PSSM: P0      A      C      G      T
01     64     13    391     32      G
02     81      4    367     48      G
03    324     22    141     13      r
04    327     73     78     22      a
05    203     25     24    248      w
06     49     43     76    332      t
07     11    123     27    339      t
08     20    451      5     24      C
09     13    458      0     29      C
10    197    234     14     55      m
11    142    109    121    128      w
12    147     71    133    149      d
13    203    126    116     55      m
14     59     65     24    352      T
15     34     39    123    304      t
16    103     67    173    157      k
17     62    261     88     89      c
18    115    123    136    126      k
19    139    192     37    132      h
20    278    179     28     15      m
21    312     60     58     70      a
22     61    138    108    193      y
Binding TFs: TF65_MOUSE (Rel homology domain (RHD))
			
Publications: Kulakovskiy IV, Vorontsov IE, Yevshin IS, Soboleva AV, Kasianov AS, Ashoor H, Ba-Alawi W, Bajic VB, Medvedeva YA, Kolpakov FA, Makeev VJ. HOCOMOCO: expansion and enhancement of the collection of transcription factor binding sites models. Nucleic Acids Res : (2016). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
Disclaimer and license


These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.