DNA Binding Motif
| Accessions: | MA1449.1 (JASPAR 2024) |
| Names: | hlh-30 |
| Organisms: | Caenorhabditis elegans |
| Libraries: | JASPAR 2024 1 1 Rauluseviciute I, Riudavets-Puig R, Blanc-Mathieu R, Castro-Mondragon JA, Ferenc K, Kumar V, Lemma RB, Lucas J, Cheneby J, Baranasic D, Khan A, Fornes O, Gundersen S, Johansen M, Hovig E, Lenhard B, Sandelin A, Wasserman WW, Parcy F, Mathelier A. JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2023). [Pubmed] |
| Notes: | ChIP-seq |
| Length: | 12 |
| Consensus: | wrTCACGTGAyw |
| Weblogo: |  |
| PSSM: | P0 A C G T 01 513 371 404 474 w 02 695 158 664 245 r 03 125 181 104 1352 T 04 6 1739 11 6 C 05 1667 16 12 67 A 06 14 1562 31 155 C 07 155 31 1562 14 G 08 67 12 16 1667 T 09 6 11 1739 6 G 10 1352 104 181 125 A 11 245 664 158 695 y 12 474 404 371 513 w |
| Type: | Heterodimer |
| Binding TFs: | H2KZZ2 (Helix-loop-helix DNA-binding domain) H2KZZ2 |
| Binding Sites: | MA1449.1.1 MA1449.1.10 MA1449.1.11 MA1449.1.12 MA1449.1.13 MA1449.1.14 MA1449.1.15 MA1449.1.16 MA1449.1.17 MA1449.1.18 MA1449.1.19 MA1449.1.2 MA1449.1.20 MA1449.1.3 MA1449.1.4 MA1449.1.5 MA1449.1.6 MA1449.1.7 / MA1449.1.8 MA1449.1.9 |
| Publications: | Grove C.A, De Masi F, Barrasa M.I, Newburger D.E, Alkema M.J, Bulyk M.L, Walhout A.J. A multiparameter network reveals extensive divergence between C. elegans bHLH transcription factors. Cell 138:314-27 (2009). [Pubmed] |
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