DNA Binding Motif
| Accessions: | UP00552A_6 (UniPROBE 20160601) |
| Names: | LUX, LUX ARRHYTHMO, PCL1, PHYTOCLOCK 1, Transcription factor LUX |
| Organisms: | Arabidopsis thaliana |
| Libraries: | UniPROBE 20160601 1 1 Hume MA, Barrera LA, Gisselbrecht SS, Bulyk ML. UniPROBE, update 2015: new tools and content for the online database of protein-binding microarray data on protein-DNA interactions. Nucleic Acids Res : (2015). [Pubmed] |
| Length: | 14 |
| Consensus: | kwaAGATwygstka |
| Weblogo: |  |
| PSSM: | P0 A C G T 01 0.15 0.19 0.37 0.30 k 02 0.26 0.24 0.18 0.33 w 03 0.45 0.21 0.12 0.22 a 04 0.72 0.03 0.03 0.21 A 05 0.02 0.01 0.91 0.06 G 06 0.97 0.01 0.01 0.01 A 07 0.04 0 0.01 0.94 T 08 0.39 0.13 0.01 0.47 w 09 0.01 0.67 0 0.31 y 10 0.08 0.07 0.65 0.20 g 11 0.11 0.43 0.36 0.10 s 12 0.17 0.24 0.08 0.52 t 13 0.24 0.20 0.26 0.31 k 14 0.44 0.20 0.17 0.19 a |
| Binding TFs: | UP00552A (Myb-like DNA-binding domain) |
| Binding Sites: | AAGATACG AAGATCTT AAGATTCG AAGATTCT AGAATATC AGATACGC AGATACGG AGATCCGC AGATCTTC AGATTCGA AGATTCGC AGATTCGG AGATTCTG ATTCTTCC CAGATTCG CGAATCTA CGTATCTA GAATATCC GCGTATCA TACGGCAA |
| Publications: | Helfer A, Nusinow DA, Chow BY, Gehrke AR, Bulyk ML, Kay SA. LUX ARRHYTHMO encodes a nighttime repressor of circadian gene expression in the Arabidopsis core clock. Curr Biol 21:126-33 (2011). [Pubmed] |
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