DNA Binding Motif

						

			
Accessions: SKOR2_methyl_1 (HT-SELEX2 May2017)

			
Names: SKOR2
Organisms: Homo sapiens
Libraries: HT-SELEX2 May2017 1
1 Yin Y, Morgunova E, Jolma A, Kaasinen E, Sahu B, Khund-Sayeed S, Das PK, Kivioja T, Dave K, Zhong F, Nitta KR, Taipale M, Popov A, Ginno PA, Domcke S, Yan J, Schübeler D, Vinson C, Taipale J. Impact of cytosine methylation on DNA binding specificities of human transcription factors. Science : (2017). [Pubmed]
Length: 14
Consensus: tAackkTAATTAms
Weblogo: 
PSSM: P0      A      C      G      T
01   1350   1294   1363   1948      t
02   4789    296    492   1167      A
03   2379   1215   1252   1110      a
04   1251   2832   1089    785      c
05    740    571   1826   4131      k
06      0      0   3761   2195      k
07      0      0      6   5956      T
08   5956     22      0      0      A
09   5956      0      0      0      A
10      0      0      8   5956      T
11     12      0      0   5956      T
12   5956      0      0      0      A
13   5956   3221      0    230      m
14   1074   1560   2049   1273      s
Binding TFs: SKOR2 (SKI/SNO/DAC family, c-SKI Smad4 binding domain)
			
Publications: Yin Y, Morgunova E, Jolma A, Kaasinen E, Sahu B, Khund-Sayeed S, Das PK, Kivioja T, Dave K, Zhong F, Nitta KR, Taipale M, Popov A, Ginno PA, Domcke S, Yan J, Schübeler D, Vinson C, Taipale J. Impact of cytosine methylation on DNA binding specificities of human transcription factors. Science : (2017). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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