DNA Binding Motif

						

			
Accessions: MA2101.1 (JASPAR 2024)

			
Names: ZNF677
Organisms: Homo sapiens
Libraries: JASPAR 2024 1
1 Rauluseviciute I, Riudavets-Puig R, Blanc-Mathieu R, Castro-Mondragon JA, Ferenc K, Kumar V, Lemma RB, Lucas J, Cheneby J, Baranasic D, Khan A, Fornes O, Gundersen S, Johansen M, Hovig E, Lenhard B, Sandelin A, Wasserman WW, Parcy F, Mathelier A. JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2023). [Pubmed]
Notes: ChIP-seq
Length: 12
Consensus: ratAAGAACAGc
Weblogo: 
PSSM: P0      A      C      G      T
01    515     98    811    157      r
02   1022    145    271    143      a
03    254    373    125    829      t
04   1498     18     49     16      A
05   1515      6     22     38      A
06     31     10   1511     29      G
07   1499     51     17     14      A
08   1339     43     65    134      A
09     34   1447     40     60      C
10   1475      9      9     88      A
11     43     35   1413     90      G
12    165    869    185    362      c
Type: Heterodimer
Binding TFs: Q86XU0 (Zinc finger, C2H2 type, KRAB box, Zinc-finger double domain, C2H2-type zinc finger, C2H2-type zinc finger)
Q86XU0
Binding Sites: MA2101.1.1
MA2101.1.10
MA2101.1.11
MA2101.1.12
MA2101.1.13
MA2101.1.14
MA2101.1.15
MA2101.1.16
MA2101.1.17
MA2101.1.18
MA2101.1.19
MA2101.1.2
MA2101.1.20
MA2101.1.3
MA2101.1.4
MA2101.1.5
MA2101.1.6
MA2101.1.7
MA2101.1.8
MA2101.1.9
			
Publications: Schmitges FW, Radovani E, Najafabadi HS, Barazandeh M, Campitelli LF, Yin Y, Jolma A, Zhong G, Guo H, Kanagalingam T, Dai WF, Taipale J, Emili A, Greenblatt JF, Hughes TR. Multiparameter functional diversity of human C2H2 zinc finger proteins. Genome Res 26:1742-1752 (2016). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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