DNA Binding Motif

						

			
Accessions: RUNX2_DBD_1 (HumanTF 1.0)

			
Names: RUNX2
Organisms: Homo sapiens
Libraries: HumanTF 1.0 1
1 Jolma A, Yan J, Whitington T, Toivonen J, Nitta KR, Rastas P, Morgunova E, Enge M, Taipale M, Wei G, Palin K, Vaquerizas JM, Vincentelli R, Luscombe NM, Hughes TR, Lemaire P, Ukkonen E, Kivioja T, Taipale J. DNA-Binding Specificities of Human Transcription Factors. Cell. 2013 Jan 17;152(1-2):327-39. [Pubmed]
Notes: Site type: dimeric; SELEX cycle: 4
Length: 16
Consensus: wrACCGCAAACCGCar
Weblogo: 
PSSM: P0      A      C      G      T
01    603    281    184    774      w
02   1170    180    625    262      r
03   1386    113    235     52      A
04     20   1538     64     28      C
05     17   1537     51     26      C
06    459     41   2242     55      G
07     20   1546     16     39      C
08   1396     11     57    179      A
09   1344     72    365     44      A
10   1384     90    166     64      A
11    103   1565    122     33      C
12     77   1550     73     92      C
13    488    114   1592     75      G
14    105   1518    118    156      C
15   1297    168    374    173      a
16    726    212    586    295      r
Binding TFs: RUNX2_DBD (Runt domain)
			
Publications: Jolma A, Yan J, Whitington T, Toivonen J, Nitta KR, Rastas P, Morgunova E, Enge M, Taipale M, Wei G, Palin K, Vaquerizas JM, Vincentelli R, Luscombe NM, Hughes TR, Lemaire P, Ukkonen E, Kivioja T, Taipale J. DNA-Binding Specificities of Human Transcription Factors. Cell. 2013 Jan 17;152(1-2):327-39. [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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