DNA Binding Motif

						

			
Accessions: UN0629.1 (JASPAR 2024)

			
Names: ZNF544
Organisms: Homo sapiens
Libraries: JASPAR 2024 1
1 Rauluseviciute I, Riudavets-Puig R, Blanc-Mathieu R, Castro-Mondragon JA, Ferenc K, Kumar V, Lemma RB, Lucas J, Cheneby J, Baranasic D, Khan A, Fornes O, Gundersen S, Johansen M, Hovig E, Lenhard B, Sandelin A, Wasserman WW, Parcy F, Mathelier A. JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2023). [Pubmed]
Length: 21
Consensus: twcyTGGCAcwgTGCCArgwa
Weblogo: 
PSSM: P0      A      C      G      T
01    152    120    154    213      t
02    219     87    116    217      w
03     58    314    123    144      c
04     15    212      2    410      y
05      3      1     14    621      T
06      2      0    637      0      G
07      0      1    638      0      G
08      1    635      2      1      C
09    463     60      7    109      A
10    117    299    116    107      c
11    170    151    149    169      w
12    107    117    299    116      g
13    109      7     59    464      T
14      1      2    635      1      G
15      0    638      1      0      C
16      0    636      0      3      C
17    620     15      1      3      A
18    412      2    210     15      r
19    144    123    313     59      g
20    217    117     87    218      w
21    214    154    120    151      a
Type: Heterodimer
Binding TFs: Q6NX49 (Zinc finger, C2H2 type, KRAB box, Zinc-finger double domain, C2H2-type zinc finger, C2H2-type zinc finger)
Q6NX49
Binding Sites: UN0629.1.2
UN0629.1.3
UN0629.1.18
UN0629.1.19
UN0629.1.20
UN0629.1.4
UN0629.1.7
UN0629.1.8
UN0629.1.13
UN0629.1.14
UN0629.1.17
UN0629.1.15
UN0629.1.16
UN0629.1.1
UN0629.1.10
UN0629.1.11
UN0629.1.12
UN0629.1.5
UN0629.1.6
UN0629.1.9
			
	
			


			

				

				
				
				
				

			

			

		

	
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These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.