DNA Binding Motif
| Accessions: | EEAD0086 (EEADannot 2023-12-22) |
| Names: | TTGACtandem |
| Organisms: | Solanum lycopersicum |
| Libraries: | EEADannot 2023-12-22 1 1 Contreras-Moreira B, Sebastian A. FootprintDB: Analysis of Plant Cis-Regulatory Elements, Transcription Factors, and Binding Interfaces. Methods Mol Biol 1482:259-77 (2016) [Pubmed] |
| Length: | 5 |
| Consensus: | TTGAC |
| Weblogo: |  |
| PSSM: | P0 A C G T 01 0 0 0 2 T 02 0 0 0 2 T 03 0 0 2 0 G 04 2 0 0 0 A 05 0 2 0 0 C |
| Binding TFs: | SlBEL2 (Homeobox domain, Homeobox KN domain, Associated with HOX) |
| Publications: | Niu XL, Li HL, Li R, Liu GS, Peng ZZ, Jia W, Ji X, Zhu HL, Zhu BZ, Grierson D, Giuliano G, Luo YB, Fu DQ. Transcription factor SlBEL2 interferes with GOLDEN2-LIKE and influences green shoulder formation in tomato fruits. Plant J 112:982-997 (2022). [Pubmed] |
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These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.