DNA Binding Motif
| Accessions: | MA1732.1 (JASPAR 2024), MA1750.1 (JASPAR 2024) |
| Names: | E2FD, E2FE |
| Organisms: | Arabidopsis thaliana |
| Libraries: | JASPAR 2024 1 1 Rauluseviciute I, Riudavets-Puig R, Blanc-Mathieu R, Castro-Mondragon JA, Ferenc K, Kumar V, Lemma RB, Lucas J, Cheneby J, Baranasic D, Khan A, Fornes O, Gundersen S, Johansen M, Hovig E, Lenhard B, Sandelin A, Wasserman WW, Parcy F, Mathelier A. JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2023). [Pubmed] |
| Notes: | DAP-seq |
| Length: | 15 |
| Consensus: | tTTTTGGCGGGAAAA |
| Weblogo: |  |
| PSSM: | P0 A C G T 01 207.65 9.107 246 537 t 02 104 1.821 12.75 882 T 03 47.359 3.643 1.821 947 T 04 36.43 0 7.286 956 T 05 14.572 1.821 5.464 978 T 06 5.464 3.643 989 1.821 G 07 0 0 1000 0 G 08 1.821 998 0 0 C 09 1.821 0 996 1.821 G 10 1.821 14.572 984 0 G 11 0 10.929 987.25 1.821 G 12 993 0 7.286 0 A 13 1000 0 0 0 A 14 958 12.75 10.929 18.215 A 15 774 51.002 21.858 153 A |
| Type: | Heterodimer |
| Binding TFs: | Q9LFQ9 (E2F/DP family winged-helix DNA-binding domain) Q8LSZ4 (E2F/DP family winged-helix DNA-binding domain) Q8LSZ4 Q9LFQ9 |
| Publications: | Vandepoele K, Vlieghe K, Florquin K, Hennig L, Beemster GT, Gruissem W, Van de Peer Y, Inzé D, De Veylder L. Genome-wide identification of potential plant E2F target genes. Plant Physiol 139:316-28 (2005). [Pubmed] |
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