DNA Binding Motif

						

			
Accessions: CUX2_HUMAN.H10MO.D|M01072 (HOCOMOCO 10)

			
Libraries: HOCOMOCO 10 1
1 Kulakovskiy IV, Vorontsov IE, Yevshin IS, Soboleva AV, Kasianov AS, Ashoor H, Ba-Alawi W, Bajic VB, Medvedeva YA, Kolpakov FA, Makeev VJ. HOCOMOCO: expansion and enhancement of the collection of transcription factor binding sites models. Nucleic Acids Res : (2016). [Pubmed]
Length: 21
Consensus: katcratwwrwtTATCGATya
Weblogo: 
PSSM: P0      A      C      G      T
01   6549   3359   9856   6772      k
02  15589   2860   3410   4677      a
03   3285   3016   3841  16394      t
04   4921  14894   3344   3377      c
05   8764   2185  11391   4196      r
06  16412   2412   2703   5009      a
07   5623   2115   2457  16341      t
08  11905   2374   3422   8835      w
09   8107   5529   3685   9215      w
10   7915   3176   9072   6373      r
11   9121   3034   6466   7915      w
12   4299   1623   5702  14912      t
13   2627    874   3028  20007      T
14  26048     77    215    196      A
15     69     58    127  26282      T
16     74  20086    248   6128      C
17    110     36  26344     46      G
18  25785    131    471    149      A
19    243    200    192  25901      T
20   3399   8429   1302  13406      y
21  14869   4361   3068   4238      a
			
Publications: Kulakovskiy IV, Vorontsov IE, Yevshin IS, Soboleva AV, Kasianov AS, Ashoor H, Ba-Alawi W, Bajic VB, Medvedeva YA, Kolpakov FA, Makeev VJ. HOCOMOCO: expansion and enhancement of the collection of transcription factor binding sites models. Nucleic Acids Res : (2016). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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