DNA Binding Motif

						

			
Accessions: EEAD0093 (EEADannot 2023-12-22)

			
Names: bZIP1_2
Organisms: Arabidopsis thaliana
Libraries: EEADannot 2023-12-22 1
1 Contreras-Moreira B, Sebastian A. FootprintDB: Analysis of Plant Cis-Regulatory Elements, Transcription Factors, and Binding Interfaces. Methods Mol Biol 1482:259-77 (2016) [Pubmed]
Length: 11
Consensus: TGmCACGTGkm
Weblogo: 
PSSM: P0      A      C      G      T
01     21     32      7    205      T
02      9      4    237     15      G
03     91    174      0      0      m
04      0    265      0      0      C
05    264      0      1      0      A
06      0    262      2      1      C
07      2      0    258      5      G
08      0      1      0    264      T
09      9      0    256      0      G
10      0      2    116    147      k
11    104    119     15     27      m
Binding TFs: AtbZIP1 (bZIP transcription factor, Basic region leucine zipper)
			
Publications: Li M, Yao T, Lin W, Hinckley WE, Galli M, Muchero W, Gallavotti A, Chen JG, Huang SC. Double DAP-seq uncovered synergistic DNA binding of interacting bZIP transcription factors. Nat Commun 14:2600 (2023). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.