DNA Binding Motif

						

			
Accessions: M0032 (AthalianaCistrome v4_May2016)

			
Names: ERF13.ampDAP, T07742;
Organisms: Arabidopsis thaliana
Libraries: AthalianaCistrome v4_May2016 1
1 O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). [Pubmed]
Length: 15
Consensus: hwryGGCGGCkrmgg
Weblogo: 
PSSM: P0      A      C      G      T
01    181    169     61    167      h
02    242     54    133    149      w
03    303     49    156     70      r
04    100    201      6    271      y
05      3      0    575      0      G
06     51      0    484     43      G
07      1    577      0      0      C
08      0      0    573      5      G
09      2      0    576      0      G
10      0    577      0      1      C
11      5     31    307    235      k
12    155    111    288     24      r
13    216    156     64    142      m
14    127     58    255    138      g
15    135     78    268     97      g
Binding TFs: T07742 (AP2 domain)
			
Publications: O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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