DNA Binding Motif

						

			
Accessions: MA0296.1 (JASPAR 2024)

			
Names: FKH1
Organisms: Saccharomyces cerevisiae
Libraries: JASPAR 2024 1
1 Rauluseviciute I, Riudavets-Puig R, Blanc-Mathieu R, Castro-Mondragon JA, Ferenc K, Kumar V, Lemma RB, Lucas J, Cheneby J, Baranasic D, Khan A, Fornes O, Gundersen S, Johansen M, Hovig E, Lenhard B, Sandelin A, Wasserman WW, Parcy F, Mathelier A. JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2023). [Pubmed]
Notes: PBM
Length: 20
Consensus: ygwwwtGTAAACAAagrrga
Weblogo: 
PSSM: P0      A      C      G      T
01    177    287    207    326      y
02    247    192    334    225      g
03    520     84     98    297      w
04    526     76    129    267      w
05    365     73    150    411      w
06    119    146    133    600      t
07    146      4    847      1      G
08      7      3      0    987      T
09    959     37      0      1      A
10    977     11      1      9      A
11    990      1      2      5      A
12      1    925      1     71      C
13    990      1      3      4      A
14    874     39     16     69      A
15    671     49     70    208      a
16    248    191    407    152      g
17    374    158    296    170      r
18    284    184    330    200      r
19    205    116    452    225      g
20    421    192    248    137      a
Type: Heterodimer
Binding TFs: P40466 (Fork head domain, FHA domain)
P40466
			
Publications: Newburger D.E, Bulyk M.L. UniPROBE: an online database of protein binding microarray data on protein-DNA interactions. Nucleic acids research 37:D77-82 (2009). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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