DNA Binding Motif

						

			
Accessions: M0325 (AthalianaCistrome v4_May2016)

			
Names: AtIDD11.DAP, T16726;
Organisms: Arabidopsis thaliana
Libraries: AthalianaCistrome v4_May2016 1
1 O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). [Pubmed]
Length: 21
Consensus: tttttwttTTTGTCkTtTtyt
Weblogo: 
PSSM: P0      A      C      G      T
01    132    104     90    248      t
02    135    108     70    261      t
03    139    129     67    239      t
04    117    114    100    243      t
05    123    113     71    267      t
06    158     77     90    249      w
07    131     83     81    279      t
08     85     94     42    353      t
09     16     76     28    454      T
10      0     14      9    551      T
11      0      6      0    568      T
12      1      0    573      0      G
13      0      0      1    573      T
14      4    536      0     34      C
15     24     60    185    305      k
16     31     60     46    437      T
17     84    104     50    336      t
18    105     22     26    421      T
19    109     77     29    359      t
20     96    197    125    156      y
21     79    127     70    298      t
Binding TFs: T16726 (Zinc finger, C2H2 type, Zinc-finger double-stranded RNA-binding)
			
Publications: O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.