DNA Binding Motif

Accessions: MA0039.4 (JASPAR 2024)
Names: KLF4
Organisms: Homo sapiens
Libraries: JASPAR 2024 1
1 Rauluseviciute I, Riudavets-Puig R, Blanc-Mathieu R, Castro-Mondragon JA, Ferenc K, Kumar V, Lemma RB, Lucas J, Cheneby J, Baranasic D, Khan A, Fornes O, Gundersen S, Johansen M, Hovig E, Lenhard B, Sandelin A, Wasserman WW, Parcy F, Mathelier A. JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2023). [Pubmed]
Notes: ChIP-seq
Length: 12
Consensus: ssCCCCACCChs
Weblogo:
PSSM: P0 A C G T
01 12570 17520 14243 11484 s
02 11487 14038 18473 11819 s
03 2465 49209 1583 2560 C
04 2105 47865 1214 4633 C
05 7021 45405 1422 1969 C
06 1173 52875 793 976 C
07 45602 161 6598 3456 A
08 852 52366 1470 1129 C
09 1617 51112 1870 1218 C
10 1202 51045 1005 2565 C
11 16264 18249 6292 15012 h
12 9959 19217 14422 12219 s
Type: Heterodimer
Binding TFs: O43474 (Zinc finger, C2H2 type, Zinc-finger double domain, C2H2-type zinc finger)
O43474
Binding Sites: MA0039.4.1
MA0039.4.10
MA0039.4.11 / MA0039.4.8
MA0039.4.12
MA0039.4.13 / MA0039.4.9
MA0039.4.10 / MA0039.4.14
MA0039.4.11 / MA0039.4.15
MA0039.4.16
MA0039.4.12 / MA0039.4.17
MA0039.4.18
MA0039.4.19
MA0039.4.1 / MA0039.4.2
MA0039.4.13 / MA0039.4.20
MA0039.4.2 / MA0039.4.3
MA0039.4.3 / MA0039.4.4
MA0039.4.5
MA0039.4.6
MA0039.4.7
MA0039.4.8
MA0039.4.7 / MA0039.4.9
MA0039.4.14
MA0039.4.15
MA0039.4.16
MA0039.4.17
MA0039.4.18
MA0039.4.19
MA0039.4.20
MA0039.4.4
Publications: Yin Y, Morgunova E, Jolma A, Kaasinen E, Sahu B, Khund-Sayeed S, Das PK, Kivioja T, Dave K, Zhong F, Nitta KR, Taipale M, Popov A, Ginno PA, Domcke S, Yan J, Schübeler D, Vinson C, Taipale J. Impact of cytosine methylation on DNA binding specificities of human transcription factors. Science : (2017). [Pubmed]

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These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.