DNA Binding Motif

						

			
Accessions: LHX8_methyl_3 (HT-SELEX2 May2017)

			
Names: LHX8
Organisms: Homo sapiens
Libraries: HT-SELEX2 May2017 1
1 Yin Y, Morgunova E, Jolma A, Kaasinen E, Sahu B, Khund-Sayeed S, Das PK, Kivioja T, Dave K, Zhong F, Nitta KR, Taipale M, Popov A, Ginno PA, Domcke S, Yan J, Schübeler D, Vinson C, Taipale J. Impact of cytosine methylation on DNA binding specificities of human transcription factors. Science : (2017). [Pubmed]
Length: 12
Consensus: TrATTGCAATyA
Weblogo: 
PSSM: P0      A      C      G      T
01     37     37      0    460      T
02    238      7    223     28      r
03    460      5     10      7      A
04     16     13     24    460      T
05     15     35     14    460      T
06     86     15    460      9      G
07      0    460     17     75      C
08    460     22     18     17      A
09    460     23     24     13      A
10      6     17      9    460      T
11     17    218     12    242      y
12    460     21     41     46      A
Binding TFs: LHX8 (Homeobox domain, LIM domain, Homeobox KN domain)
			
Publications: Yin Y, Morgunova E, Jolma A, Kaasinen E, Sahu B, Khund-Sayeed S, Das PK, Kivioja T, Dave K, Zhong F, Nitta KR, Taipale M, Popov A, Ginno PA, Domcke S, Yan J, Schübeler D, Vinson C, Taipale J. Impact of cytosine methylation on DNA binding specificities of human transcription factors. Science : (2017). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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