DNA Binding Motif

						

			
Accessions: HOXC11_3 (HT-SELEX2 May2017)

			
Names: HOXC11
Organisms: Homo sapiens
Libraries: HT-SELEX2 May2017 1
1 Yin Y, Morgunova E, Jolma A, Kaasinen E, Sahu B, Khund-Sayeed S, Das PK, Kivioja T, Dave K, Zhong F, Nitta KR, Taipale M, Popov A, Ginno PA, Domcke S, Yan J, Schübeler D, Vinson C, Taipale J. Impact of cytosine methylation on DNA binding specificities of human transcription factors. Science : (2017). [Pubmed]
Length: 11
Consensus: grTCGTWAAay
Weblogo: 
PSSM: P0      A      C      G      T
01   2732   2408   4817   1633      g
02   4022   1928   7568      0      r
03     59    307     24  11590      T
04    146  11590      0    288      C
05   3380      0  11590      0      G
06      0      0      0  11590      T
07  11590      0     23   5013      W
08  11590     19      0    384      A
09  11590    215     14    256      A
10  11590   4501   2548   5656      a
11   2680   3665   2183   3063      y
Binding TFs: HOXC11 (Homeobox domain)
			
Publications: Yin Y, Morgunova E, Jolma A, Kaasinen E, Sahu B, Khund-Sayeed S, Das PK, Kivioja T, Dave K, Zhong F, Nitta KR, Taipale M, Popov A, Ginno PA, Domcke S, Yan J, Schübeler D, Vinson C, Taipale J. Impact of cytosine methylation on DNA binding specificities of human transcription factors. Science : (2017). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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