DNA Binding Motif

						

			
Accessions: MA2344.1 (JASPAR 2024)

			
Names: REV
Organisms: Arabidopsis thaliana
Libraries: JASPAR 2024 1
1 Rauluseviciute I, Riudavets-Puig R, Blanc-Mathieu R, Castro-Mondragon JA, Ferenc K, Kumar V, Lemma RB, Lucas J, Cheneby J, Baranasic D, Khan A, Fornes O, Gundersen S, Johansen M, Hovig E, Lenhard B, Sandelin A, Wasserman WW, Parcy F, Mathelier A. JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2023). [Pubmed]
Notes: ChIP-seq
Length: 14
Consensus: aATmATCATTATTa
Weblogo: 
PSSM: P0      A      C      G      T
01    235     54     36     60      a
02    276     32     41     36      A
03     41     27     21    296      T
04    159    194      4     28      m
05    349     11      9     16      A
06      3      5      4    373      T
07     24    318     17     26      C
08    373      5      3      4      A
09      5     11      0    369      T
10     21     39     17    308      T
11    360      5      8     12      A
12     18     36     18    313      T
13     37     27     22    299      T
14    256     40     26     63      a
Binding TFs: Q9SE43
Binding Sites: MA2344.1.1
MA2344.1.10
MA2344.1.11
MA2344.1.12
MA2344.1.13
MA2344.1.14
MA2344.1.15
MA2344.1.16
MA2344.1.17
MA2344.1.18
MA2344.1.19
MA2344.1.2
MA2344.1.20
MA2344.1.3
MA2344.1.4
MA2344.1.5
MA2344.1.6
MA2344.1.7
MA2344.1.8
MA2344.1.9
			
Publications: Xie Y, Huhn K, Brandt R, Potschin M, Bieker S, Straub D, Doll J, Drechsler T, Zentgraf U, Wenkel S. REVOLUTA and WRKY53 connect early and late leaf development in Arabidopsis. Development 141:4772-83 (2014). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.