DNA Binding Motif

						

			
Accessions: ZSCAN9_methyl_1 (HT-SELEX2 May2017)

			
Names: ZSCAN9
Organisms: Homo sapiens
Libraries: HT-SELEX2 May2017 1
1 Yin Y, Morgunova E, Jolma A, Kaasinen E, Sahu B, Khund-Sayeed S, Das PK, Kivioja T, Dave K, Zhong F, Nitta KR, Taipale M, Popov A, Ginno PA, Domcke S, Yan J, Schübeler D, Vinson C, Taipale J. Impact of cytosine methylation on DNA binding specificities of human transcription factors. Science : (2017). [Pubmed]
Length: 20
Consensus: raGGATAAGATAAGAAkCay
Weblogo: 
PSSM: P0      A      C      G      T
01    873    216    483    190      r
02   1107    175    458    135      a
03    194     82   1418    257      G
04      0      0   1762      0      G
05   1762      0      0      0      A
06     34     10      2   1757      T
07   1762      2      0     33      A
08   1762      0      0      0      A
09      0      0   1762      0      G
10   1762      0      0      0      A
11      0      0      0   1762      T
12   1762      0      0      0      A
13   1762      0      0      0      A
14      0      2   1762      0      G
15   1694    130      0      4      A
16   1751      0      8     23      A
17     60    406    474    822      k
18    153   1604     44    138      C
19   1253    329    286     97      a
20    413    501    377    471      y
Binding TFs: ZSCAN9 (Zinc finger, C2H2 type, Zinc-finger double domain, C2H2-type zinc finger, C2H2-type zinc finger)
			
Publications: Yin Y, Morgunova E, Jolma A, Kaasinen E, Sahu B, Khund-Sayeed S, Das PK, Kivioja T, Dave K, Zhong F, Nitta KR, Taipale M, Popov A, Ginno PA, Domcke S, Yan J, Schübeler D, Vinson C, Taipale J. Impact of cytosine methylation on DNA binding specificities of human transcription factors. Science : (2017). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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