DNA Binding Motif

						

			
Accessions: RFX3_ETV7 (HumanTF2 1.0)

			
Names: RFX3_ETV7
Organisms: Homo sapiens
Libraries: HumanTF2 1.0 1
1 Jolma A, Yin Y, Nitta KR, Dave K, Popov A, Taipale M, Enge M, Kivioja T, Morgunova E, Taipale J. DNA-dependent formation of transcription factor pairs alters their binding specificity. Nature 527:384-8 (2015). [Pubmed]
Notes: Site type: heterodimeric; Experiment type: CAP-SELEX
Length: 25
Consensus: ascmGGAAgyryTTCCyTrgCaACs
Weblogo: 
PSSM: P0      A      C      G      T
01    211     48    115    119      a
02     98    178    147     71      s
03     93    284     66     51      c
04    204    290     56     24      m
05     13      3    494      0      G
06      0      4    494      0      G
07    494      4      0     12      A
08    494     47      2     72      A
09    116     77    281     20      g
10     74    142     45    233      y
11    216     56    140     82      r
12     13    310     46    125      y
13     64      0     24    409      T
14      4      2      0    494      T
15      5    494      2      4      C
16      2    494      0      0      C
17     11    182     82    219      y
18     18     49     76    352      T
19    236     59    182     17      r
20    146     53    348     47      g
21     26    494     24     62      C
22    494     15    170    134      a
23    494     26     42     25      A
24      6    494      0     26      C
25     72    147    238     36      s
Type: Heterodimer
Binding TFs: ETV7_TF1 / ETV7_TF2 (Ets-domain, Sterile alpha motif (SAM)/Pointed domain)
RFX3_TF1 (RFX DNA-binding domain)
			
Publications: Jolma A, Yin Y, Nitta KR, Dave K, Popov A, Taipale M, Enge M, Kivioja T, Morgunova E, Taipale J. DNA-dependent formation of transcription factor pairs alters their binding specificity. Nature 527:384-8 (2015). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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