DNA Binding Motif
| Accessions: | 4wu4_AB (3D-footprint 20231221) |
| Names: | Response regulator receiver domain protein |
| Organisms: | Enterococcus faecalis S613 |
| Libraries: | 3D-footprint 20231221 1 1 Contreras-Moreira B. 3D-footprint: a database for the structural analysis of protein-DNA complexes. Nucleic acids research 38:D91-7 (2010). [Pubmed] |
| Description: | Crystal structure of E. faecalis DNA binding domain LiaRD191N complexed with 22bp DNA |
| Length: | 14 |
| Consensus: | TCGTnCnnnaGnCC |
| Weblogo: |  |
| PSSM: | P0 A C G T 01 0 0 0 96 T 02 0 90 0 6 C 03 0 0 96 0 G 04 5 10 7 74 T 05 24 24 24 24 n 06 0 96 0 0 C 07 24 24 24 24 n 08 24 24 24 24 n 09 24 24 24 24 n 10 64 16 10 6 a 11 5 16 70 5 G 12 24 24 24 24 n 13 5 74 0 17 C 14 0 96 0 0 C |
| Binding TFs: | 4wu4_A / 4wu4_B (Bacterial regulatory proteins, luxR family, Sigma-70, region 4) |
| Binding Sites: | 4wu4_G 4wu4_H |
| Publications: | Davlieva M, Shi Y, Leonard P.G, Johnson T.A, Zianni M.R, Arias C.A, Ladbury J.E, Shamoo Y. A variable DNA recognition site organization establishes the LiaR-mediated cell envelope stress response of enterococci to daptomycin. Nucleic acids research 43:4758-73 (2015). [Pubmed] |
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