DNA Binding Motif

						

			
Accessions: DnaA (DBTBS 1.0)

			
Names: DnaA
Organisms: Bacillus subtilis
Libraries: DBTBS 1.0 1
1 Sierro N, Makita Y, de Hoon M, Nakai K. DBTBS: a database of transcriptional regulation in Bacillus subtilis containing upstream intergenic conservation information. Nucleic acids research 36:D93-6 (2008). [Pubmed]
Length: 12
Consensus: ArsTTATCCACA
Weblogo: 
PSSM: P0      A      C      G      T
01      9      0      0      1      A
02      4      1      3      2      r
03      1      5      3      1      s
04      1      1      1      7      T
05      0      0      0     10      T
06      8      0      2      0      A
07      0      0      0     10      T
08      0     10      0      0      C
09      0      9      1      0      C
10     10      0      0      0      A
11      0     10      0      0      C
12     10      0      0      0      A
Binding TFs: DnaA (ATPase family associated with various cellular activities (AAA), Bacterial dnaA  protein, IstB-like ATP binding protein, Bacterial dnaA protein helix-turn-helix, DnaA N-terminal domain)
Binding Sites: dnaA_1
dnaA_2
dnaA_3
dnaA_4
dnaA_5
dnaA_6
dnaA_7
dnaA_8
dnaA_9
sda_2
			
Publications: Fukuoka T, Moriya S, Yoshikawa H, Ogasawara N. Purification and characterization of an initiation protein for chromosomal replication, DnaA, in Bacillus subtilis. Journal of biochemistry 107:732-9 (1990). [Pubmed]


Burkholder W.F, Kurtser I, Grossman A.D. Replication initiation proteins regulate a developmental checkpoint in Bacillus subtilis. Cell 104:269-79 (2001). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
Disclaimer and license


These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.