DNA Binding Motif

						

			
Accessions: M0385 (AthalianaCistrome v4_May2016)

			
Names: At2g01060.ampDAP, T10700;
Organisms: Arabidopsis thaliana
Libraries: AthalianaCistrome v4_May2016 1
1 O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). [Pubmed]
Length: 15
Consensus: awawwrGAATmTtcy
Weblogo: 
PSSM: P0      A      C      G      T
01    226    101    135    134      a
02    218    124     93    161      w
03    275     98     80    143      a
04    271     57    108    160      w
05    220     96    107    173      w
06    261    144    190      1      r
07      0      0    595      1      G
08    497     66      5     28      A
09    591      0      0      5      A
10      0      0      0    596      T
11    346    250      0      0      m
12     12      0      0    584      T
13    112     75     81    328      t
14     79    320     52    145      c
15    139    164     74    219      y
Binding TFs: T10700 (Myb-like DNA-binding domain, MYB-CC type transfactor, LHEQLE motif)
			
Publications: O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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