DNA Binding Motif

						

			
Accessions: MA0746.3 (JASPAR 2024)

			
Names: SP3
Organisms: Homo sapiens
Libraries: JASPAR 2024 1
1 Rauluseviciute I, Riudavets-Puig R, Blanc-Mathieu R, Castro-Mondragon JA, Ferenc K, Kumar V, Lemma RB, Lucas J, Cheneby J, Baranasic D, Khan A, Fornes O, Gundersen S, Johansen M, Hovig E, Lenhard B, Sandelin A, Wasserman WW, Parcy F, Mathelier A. JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2023). [Pubmed]
Notes: HT-SELEX
Length: 11
Consensus: rCCACGCCCmC
Weblogo: 
PSSM: P0      A      C      G      T
01   2146    531   4445    421      r
02    664   6591    226    345      C
03    160   6591     54    202      C
04   5253   1338      2     11      A
05      6   6591      0     12      C
06    465      0   6591    504      G
07      0   6591      0      0      C
08      0   6591      0      9      C
09      2   6591      2    718      C
10   3430   3160     39    552      m
11    556   5116    297   1475      C
Type: Heterodimer
Binding TFs: Q02447 (Zinc finger, C2H2 type, Zinc-finger double domain, C2H2-type zinc finger)
Q02447
			
Publications: Yokoyama KD, Pollock DD. SP transcription factor paralogs and DNA-binding sites coevolve and adaptively converge in mammals and birds. Genome Biol Evol : (2012;4(11):1102-17.). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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