DNA Binding Motif

						

			
Accessions: M0673 (AthalianaCistrome v4_May2016)

			
Names: ANAC013.DAP, T05444;
Organisms: Arabidopsis thaliana
Libraries: AthalianaCistrome v4_May2016 1
1 O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). [Pubmed]
Length: 16
Consensus: CTTGsrgarCAAGyaA
Weblogo: 
PSSM: P0      A      C      G      T
01      0    598      0      1      C
02      0      0    132    467      T
03      0      0      0    599      T
04     14      0    585      0      G
05    133    151    195    120      s
06    169    113    210    107      r
07    136    109    262     92      g
08    344     70    115     70      a
09    316     40    198     45      r
10     28    492     66     13      C
11    599      0      0      0      A
12    507     90      2      0      A
13      0      0    593      6      G
14    104    164    140    191      y
15    351    121     12    115      a
16    532      9     13     45      A
Binding TFs: T05444 (No apical meristem (NAM) protein)
			
Publications: O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.