DNA Binding Motif
| Accessions: | UP00081A_2 (UniPROBE 20160601), UP00092A_4 (UniPROBE 20160601) |
| Names: | A-myb, Amyb, MGC123416, Myb-related protein A, Mybl1, myeloblastosis oncogene-like 1, AI550390, c-myb, M16449, MGC18531, Myb, Myb proto-oncogene protein, myeloblastosis oncogene |
| Organisms: | Mus musculus |
| Libraries: | UniPROBE 20160601 1 1 Hume MA, Barrera LA, Gisselbrecht SS, Bulyk ML. UniPROBE, update 2015: new tools and content for the online database of protein-binding microarray data on protein-DNA interactions. Nucleic Acids Res : (2015). [Pubmed] |
| Length: | 15 |
| Consensus: | bsaCCAACTGcCgwk |
| Weblogo: |  |
| PSSM: | P0 A C G T 01 0.21 0.27 0.26 0.26 b 02 0.15 0.33 0.34 0.18 s 03 0.44 0.21 0.18 0.17 a 04 0.06 0.77 0.05 0.13 C 05 0.06 0.77 0.01 0.16 C 06 0.98 0.01 0 0.01 A 07 0.98 0.02 0 0 A 08 0.01 0.98 0.01 0.01 C 09 0.03 0.14 0.05 0.79 T 10 0.01 0.01 0.98 0.01 G 11 0.19 0.57 0.04 0.21 c 12 0.11 0.81 0.02 0.07 C 13 0.24 0.10 0.56 0.10 g 14 0.28 0.21 0.10 0.40 w 15 0.15 0.19 0.41 0.25 k |
| Type: | Heterodimer |
| Binding TFs: | UP00081A (Myb-like DNA-binding domain, Myb-like DNA-binding domain) UP00092A (Myb-like DNA-binding domain, Myb-like DNA-binding domain) |
| Binding Sites: | AAACCGTC AAACCGTT AAACGGTT AACCGTCA AACCGTCG AACCGTTG AACGGTCA AACGGTCG AACGGTTA AACGGTTC AACGGTTG ACCGTTAA ACCGTTAT ACCGTTGA AGCCGTTA ATCCGTTA CAACCGTC CAACGGTC CAACTGCC CCAACGGC GACCGTTA GACGGTTA ACCGTTGG CAACCGAC |
| Publications: | Badis G, Berger M.F, Philippakis A.A, Talukder S, Gehrke A.R, Jaeger S.A, Chan E.T, Metzler G, Vedenko A, Chen X, Kuznetsov H, Wang C.F, Coburn D, Newburger D.E, Morris Q, Hughes T.R, Bulyk M.L. Diversity and complexity in DNA recognition by transcription factors. Science (New York, N.Y.) 324:1720-3 (2009). [Pubmed] |
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