DNA Binding Motif

						

			
Accessions: Hoxa10_1 (HumanTF2 1.0)

			
Names: Hoxa10
Organisms: Pantheropsis Guttatus
Libraries: HumanTF2 1.0 1
1 Jolma A, Yin Y, Nitta KR, Dave K, Popov A, Taipale M, Enge M, Kivioja T, Morgunova E, Taipale J. DNA-dependent formation of transcription factor pairs alters their binding specificity. Nature 527:384-8 (2015). [Pubmed]
Notes: Site type: heterodimeric; Experiment type: HT-SELEX; HT-SELEX generated reference PWM
Length: 11
Consensus: rRTmRTAAAAy
Weblogo: 
PSSM: P0      A      C      G      T
01    497    251    941    213      r
02    533    129   1437      4      R
03     14    177      4   1437      T
04    742   1437      2      0      m
05    392      6   1045      0      R
06     11      2      5   1437      T
07   1437     13      0    210      A
08   1437      0      0      6      A
09   1437     28      0      0      A
10   1437    150     65    394      A
11    337    436    123    541      y
Binding TFs: Hoxa10_TF1 (Homeobox domain)
			
Publications: Jolma A, Yin Y, Nitta KR, Dave K, Popov A, Taipale M, Enge M, Kivioja T, Morgunova E, Taipale J. DNA-dependent formation of transcription factor pairs alters their binding specificity. Nature 527:384-8 (2015). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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