DNA Binding Motif
| Accessions: | UP00395A_1 (UniPROBE 20160601) |
| Names: | Cgd2_3490, NONE |
| Organisms: | Cryptosporidium parvum |
| Libraries: | UniPROBE 20160601 1 1 Hume MA, Barrera LA, Gisselbrecht SS, Bulyk ML. UniPROBE, update 2015: new tools and content for the online database of protein-binding microarray data on protein-DNA interactions. Nucleic Acids Res : (2015). [Pubmed] |
| Length: | 14 |
| Consensus: | mmmyGCATGCrysc |
| Weblogo: |  |
| PSSM: | P0 A C G T 01 0.31 0.31 0.14 0.24 m 02 0.27 0.29 0.20 0.24 m 03 0.28 0.43 0.11 0.19 m 04 0 0.64 0.01 0.35 y 05 0.01 0 0.99 0 G 06 0 1 0 0 C 07 1 0 0 0 A 08 0 0 0 1 T 09 0 0 1 0 G 10 0 0.99 0 0.01 C 11 0.66 0 0.34 0 r 12 0.16 0.27 0.18 0.38 y 13 0.11 0.37 0.31 0.21 s 14 0.13 0.48 0.17 0.22 c |
| Binding TFs: | UP00395A (AP2 domain) |
| Binding Sites: | ACGCATGC AGCATGCA AGCATGCG AGGCATGC ATGCATGC CATGCATG CCGCATGC CGCATGCA CGCATGCC CGCATGCG CTGCATGC GCATGCAA GCATGCAC GCATGCGA GCATGCGC GCATGCTA GGCATGCA TGCATGCA CGGCATGC GAGCATGC |
| Publications: | De Silva EK, Gehrke AR, Olszewki K, Leon I, Chahal JS, Bulyk ML, Llinas M. Specific DNA-binding by Apicomplexan AP2 transcription factors. Proc. Natl. Acad. Sci. USA. June 17, 2008; vol. 105, no. 24, 8393-8398 [Pubmed] |
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