DNA Binding Motif

Accessions: UN0798.1 (JASPAR 2024)
Names: zf30C
Organisms: Drosophila melanogaster
Libraries: JASPAR 2024 1
1 Rauluseviciute I, Riudavets-Puig R, Blanc-Mathieu R, Castro-Mondragon JA, Ferenc K, Kumar V, Lemma RB, Lucas J, Cheneby J, Baranasic D, Khan A, Fornes O, Gundersen S, Johansen M, Hovig E, Lenhard B, Sandelin A, Wasserman WW, Parcy F, Mathelier A. JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2023). [Pubmed]
Notes: ChIP-seq
Length: 14
Consensus: TTTyTCTCAGTGyA
Weblogo:
PSSM: P0 A C G T
01 101 79 47 837 T
02 78 60 55 871 T
03 70 54 93 847 T
04 55 622 55 332 y
05 13 28 114 909 T
06 17 826 42 179 C
07 61 95 133 775 T
08 26 975 42 21 C
09 908 27 26 103 A
10 3 17 1038 6 G
11 6 9 4 1045 T
12 9 1 1042 12 G
13 8 477 13 566 y
14 943 33 43 45 A
Binding TFs: Q9VL91
Binding Sites: UN0798.1.1
UN0798.1.10 / UN0798.1.11
UN0798.1.12
UN0798.1.13 / UN0798.1.20
UN0798.1.14
UN0798.1.15
UN0798.1.16
UN0798.1.17
UN0798.1.18
UN0798.1.19
UN0798.1.2
UN0798.1.3
UN0798.1.4
UN0798.1.5
UN0798.1.6
UN0798.1.7
UN0798.1.8
UN0798.1.9

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These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.