DNA Binding Motif

						

			
Accessions: T_4 (HT-SELEX2 May2017)

			
Names: T
Organisms: Homo sapiens
Libraries: HT-SELEX2 May2017 1
1 Yin Y, Morgunova E, Jolma A, Kaasinen E, Sahu B, Khund-Sayeed S, Das PK, Kivioja T, Dave K, Zhong F, Nitta KR, Taipale M, Popov A, Ginno PA, Domcke S, Yan J, Schübeler D, Vinson C, Taipale J. Impact of cytosine methylation on DNA binding specificities of human transcription factors. Science : (2017). [Pubmed]
Length: 18
Consensus: tTCRCACcTAgGTGyGAa
Weblogo: 
PSSM: P0      A      C      G      T
01    831    481    919   3180      t
02      7     67     44   5393      T
03   1202   4803    730    125      C
04   4835     83   1986    197      R
05     13   5411      2     33      C
06   5363      1    334     26      A
07    293   4981    245   1403      C
08   1085   2618   1268    439      c
09    696    556    286   5080      T
10   5146    329    497    539      A
11    446   1247   2635   1083      g
12   1508    178   4914    312      G
13     11    365      4   5355      T
14     37      6   5411     27      G
15    173   2003    100   4745      y
16    137    686   4714   1278      G
17   5395     66     60     47      A
18   3178    880    528    824      a
Binding TFs: T (T-box)
			
Publications: Yin Y, Morgunova E, Jolma A, Kaasinen E, Sahu B, Khund-Sayeed S, Das PK, Kivioja T, Dave K, Zhong F, Nitta KR, Taipale M, Popov A, Ginno PA, Domcke S, Yan J, Schübeler D, Vinson C, Taipale J. Impact of cytosine methylation on DNA binding specificities of human transcription factors. Science : (2017). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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