DNA Binding Motif

						

			
Accessions: M0140 (AthalianaCistrome v4_May2016)

			
Names: MP.DAP, T05933;
Organisms: Arabidopsis thaliana
Libraries: AthalianaCistrome v4_May2016 1
1 O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). [Pubmed]
Length: 10
Consensus: rCCGACAArw
Weblogo: 
PSSM: P0      A      C      G      T
01    158    139    172    131      r
02     34    489     24     53      C
03    134    462      3      1      C
04      5      0    595      0      G
05    600      0      0      0      A
06      0    600      0      0      C
07    556     44      0      0      A
08    428     26     48     98      A
09    288     64    181     67      r
10    304     63     76    157      w
Binding TFs: T05933 (AUX/IAA family, B3 DNA binding domain, Auxin response factor)
			
Publications: O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.