DNA Binding Motif

Accessions: NR5A2_methyl_1 (HT-SELEX2 May2017)
Names: NR5A2
Organisms: Homo sapiens
Libraries: HT-SELEX2 May2017 1
1 Yin Y, Morgunova E, Jolma A, Kaasinen E, Sahu B, Khund-Sayeed S, Das PK, Kivioja T, Dave K, Zhong F, Nitta KR, Taipale M, Popov A, Ginno PA, Domcke S, Yan J, Schübeler D, Vinson C, Taipale J. Impact of cytosine methylation on DNA binding specificities of human transcription factors. Science : (2017). [Pubmed]
Length: 11
Consensus: byCAAGGTCry
Weblogo:
PSSM: P0 A C G T
01 3015 5451 4523 4915 b
02 1425 5378 965 12526 y
03 434 17903 3195 207 C
04 17903 0 224 4 A
05 17903 0 39 4 A
06 0 0 17903 14 G
07 0 0 17903 0 G
08 1605 4457 193 17903 T
09 38 17903 35 1059 C
10 17903 29 9331 142 r
11 3544 7094 1908 5359 y
Binding TFs: NR5A2 (Zinc finger, C4 type (two domains))
Publications: Yin Y, Morgunova E, Jolma A, Kaasinen E, Sahu B, Khund-Sayeed S, Das PK, Kivioja T, Dave K, Zhong F, Nitta KR, Taipale M, Popov A, Ginno PA, Domcke S, Yan J, Schübeler D, Vinson C, Taipale J. Impact of cytosine methylation on DNA binding specificities of human transcription factors. Science : (2017). [Pubmed]

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