DNA Binding Motif

						

			
Accessions: TEAD4_PAX5 (HumanTF2 1.0)

			
Names: TEAD4_PAX5
Organisms: Homo sapiens
Libraries: HumanTF2 1.0 1
1 Jolma A, Yin Y, Nitta KR, Dave K, Popov A, Taipale M, Enge M, Kivioja T, Morgunova E, Taipale J. DNA-dependent formation of transcription factor pairs alters their binding specificity. Nature 527:384-8 (2015). [Pubmed]
Notes: Site type: heterodimeric; Experiment type: CAP-SELEX
Length: 29
Consensus: rCATwcctyrwrskyasysrwSCGTGACs
Weblogo: 
PSSM: P0      A      C      G      T
01   1385    242   1210    126      r
02    754   2526    288     56      C
03   2632     82    322     18      A
04     62      9     11   2758      T
05   1423     94    227   1233      w
06    706   2452    322    448      c
07    325   2388    212    664      c
08    571    402    538   1252      t
09    516    830    618    799      y
10    918    503   1051    292      r
11    755    536    630    841      w
12   1062    268   1356     78      r
13    515    721   1044    482      s
14     25    624   1205    909      k
15    144   1588     35    997      y
16   1830    138    634    161      a
17    683    698    861    522      s
18      8   1053     61   1641      y
19    228   1512   1001     21      s
20   1846      2    886     69      r
21   1271    274     97   1392      w
22     13    961   2619      3      S
23      8   2754     12     40      C
24    618      0   2600     63      G
25     82     89     73   2722      T
26    521     20   2643     38      G
27   2596     85    192    369      A
28    184   2741     23     39      C
29    564    926   1086    187      s
Type: Heterodimer
Binding TFs: PAX5_TF1 / PAX5_TF2 ('Paired box' domain)
TEAD4_TF1 (TEA/ATTS domain family)
			
Publications: Jolma A, Yin Y, Nitta KR, Dave K, Popov A, Taipale M, Enge M, Kivioja T, Morgunova E, Taipale J. DNA-dependent formation of transcription factor pairs alters their binding specificity. Nature 527:384-8 (2015). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.