DNA Binding Motif

						

			
Accessions: E2F1_1 (HT-SELEX2 May2017)

			
Names: E2F1
Organisms: Homo sapiens
Libraries: HT-SELEX2 May2017 1
1 Yin Y, Morgunova E, Jolma A, Kaasinen E, Sahu B, Khund-Sayeed S, Das PK, Kivioja T, Dave K, Zhong F, Nitta KR, Taipale M, Popov A, Ginno PA, Domcke S, Yan J, Schübeler D, Vinson C, Taipale J. Impact of cytosine methylation on DNA binding specificities of human transcription factors. Science : (2017). [Pubmed]
Length: 16
Consensus: rwTTTGGCGCCawwwy
Weblogo: 
PSSM: P0      A      C      G      T
01   1965    668   1886   1338      r
02   1657    260    327   3962      w
03    790    320    373   5226      T
04    405    199    242   5519      T
05    745    183   1081   5170      T
06    151    839   5773      0      G
07      0     26   5830      0      G
08      2   5852      0      0      C
09      0      0   5855      0      G
10      0   5839     43      0      C
11      6   5785   1539    261      C
12   4828   1942    184   1566      a
13   2978    230    183   2650      w
14   2174    402    292   3397      w
15   2286    566    377   3142      w
16   1004   1666    757   2430      y
Binding TFs: E2F1 (E2F/DP family winged-helix DNA-binding domain)
			
Publications: Yin Y, Morgunova E, Jolma A, Kaasinen E, Sahu B, Khund-Sayeed S, Das PK, Kivioja T, Dave K, Zhong F, Nitta KR, Taipale M, Popov A, Ginno PA, Domcke S, Yan J, Schübeler D, Vinson C, Taipale J. Impact of cytosine methylation on DNA binding specificities of human transcription factors. Science : (2017). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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