DNA Binding Motif

						

			
Accessions: EEAD0162 (EEADannot 2025-01-07)

			
Names: ChFLMrsat
Organisms: Crucihimalaya himalaica
Libraries: EEADannot 2025-01-07 1
1 Contreras-Moreira B, Sebastian A. FootprintDB: Analysis of Plant Cis-Regulatory Elements, Transcription Factors, and Binding Interfaces. Methods Mol Biol 1482:259-77 (2016) [Pubmed]
Length: 12
Consensus: wwaCAAAACaww
Weblogo: 
PSSM: P0      A      C      G      T
01    988    584    436    745      w
02    891    584    478    800      w
03   1709    398    235    411      a
04      6   2628     18    101      C
05   2525    105     44     79      A
06   2491    103     61     98      A
07   2542     83     49     79      A
08   2536     62     70     85      A
09      6   2601     22    124      C
10   1601    468    254    430      a
11    940    566    508    739      w
12   1013    521    456    763      w
Binding TFs: ChFLM (SRF-type transcription factor (DNA-binding and dimerisation domain), K-box region)
			
Publications: Zhai D, Zhang LY, Li LZ, Xu ZG, Liu XL, Shang GD, Zhao B, Gao J, Wang FX, Wang JW. Reciprocal conversion between annual and polycarpic perennial flowering behavior in the Brassicaceae. Cell 187:3319-3337 (2024). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.