DNA Binding Motif

						

			
Accessions: HOXB13_DBD_2 (HumanTF 1.0)

			
Names: HOXB13
Organisms: Homo sapiens
Libraries: HumanTF 1.0 1
1 Jolma A, Yan J, Whitington T, Toivonen J, Nitta KR, Rastas P, Morgunova E, Enge M, Taipale M, Wei G, Palin K, Vaquerizas JM, Vincentelli R, Luscombe NM, Hughes TR, Lemaire P, Ukkonen E, Kivioja T, Taipale J. DNA-Binding Specificities of Human Transcription Factors. Cell. 2013 Jan 17;152(1-2):327-39. [Pubmed]
Notes: Site type: monomeric; SELEX cycle: 3
Length: 11
Consensus: sCTCGTAAAah
Weblogo: 
PSSM: P0      A      C      G      T
01    277    861    862    384      s
02    122   2384    142      5      C
03      9    135      6   2384      T
04     79   2384     11    272      C
05    612      1   2384      9      G
06      2      6      0   2384      T
07   2384      9      6    433      A
08   2384      0      0     23      A
09   2384     11      1     19      A
10   2384    474    216    486      a
11    816    745    182    641      h
Binding TFs: HOXB13_DBD (Homeobox domain)
			
Publications: Jolma A, Yan J, Whitington T, Toivonen J, Nitta KR, Rastas P, Morgunova E, Enge M, Taipale M, Wei G, Palin K, Vaquerizas JM, Vincentelli R, Luscombe NM, Hughes TR, Lemaire P, Ukkonen E, Kivioja T, Taipale J. DNA-Binding Specificities of Human Transcription Factors. Cell. 2013 Jan 17;152(1-2):327-39. [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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