DNA Binding Motif

						

			
Accessions: 6jhe_A (3D-footprint 20231221)

			
Names: ECF RNA polymerase sigma factor SigW
Organisms: Bacillus subtilis, strain 168
Libraries: 3D-footprint 20231221 1
1 Contreras-Moreira B. 3D-footprint: a database for the structural analysis of protein-DNA complexes. Nucleic acids research 38:D91-7 (2010). [Pubmed]
Description: Crystal Structure of Bacillus subtilis SigW domain 4 in complexed with -35 element DNA
Length: 6
Consensus: GTtTCA
Weblogo: 
PSSM: P0      A      C      G      T
01      0      0     96      0      G
02      0      0      0     96      T
03     13     13     13     57      t
04      0     14      0     82      T
05      0     96      0      0      C
06     68      0     15     13      A
Binding TFs: 6jhe_A (Sigma-70, region 4, Sigma-70, region 4)
Binding Sites: 6jhe_B
6jhe_C
			
Publications: Kwon E, Devkota SR, Pathak D, Dahal P, Kim DY. Structural analysis of the recognition of the -35 promoter element by SigW from Bacillus subtilis. PLoS One : (2019). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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