DNA Binding Motif

						

			
Accessions: CUX1_FOXI1 (HumanTF2 1.0)

			
Names: CUX1_FOXI1
Organisms: Homo sapiens
Libraries: HumanTF2 1.0 1
1 Jolma A, Yin Y, Nitta KR, Dave K, Popov A, Taipale M, Enge M, Kivioja T, Morgunova E, Taipale J. DNA-dependent formation of transcription factor pairs alters their binding specificity. Nature 527:384-8 (2015). [Pubmed]
Notes: Site type: heterodimeric; Experiment type: CAP-SELEX
Length: 19
Consensus: rTmawCAcgmkrATCRATt
Weblogo: 
PSSM: P0      A      C      G      T
01    149     50    158     20      r
02     61     44     29    307      T
03    307    190     34     22      m
04    307     82     44     57      a
05    307     26     44    163      w
06     31    307     26     85      C
07    307     58     26     26      A
08     73    124     47     64      c
09     65     72     98     73      g
10    102    101     58     47      m
11     50     71     89     97      k
12    116     23     95     74      r
13    307      0     20     19      A
14      0      3      6    307      T
15      0    307      0     28      C
16     89      9    219      1      R
17    307      0      0     15      A
18     32      4      0    307      T
19     73     57     46    131      t
Type: Heterodimer
Binding TFs: CUX1_TF1 (Homeobox domain, CUT domain, Homeobox KN domain)
FOXI1_TF2 (Fork head domain)
			
Publications: Jolma A, Yin Y, Nitta KR, Dave K, Popov A, Taipale M, Enge M, Kivioja T, Morgunova E, Taipale J. DNA-dependent formation of transcription factor pairs alters their binding specificity. Nature 527:384-8 (2015). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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