DNA Binding Motif
| Accessions: | MA0148.1 (JASPAR 2024) |
| Names: | FOXA1 |
| Organisms: | Homo sapiens |
| Libraries: | JASPAR 2024 1 1 Rauluseviciute I, Riudavets-Puig R, Blanc-Mathieu R, Castro-Mondragon JA, Ferenc K, Kumar V, Lemma RB, Lucas J, Cheneby J, Baranasic D, Khan A, Fornes O, Gundersen S, Johansen M, Hovig E, Lenhard B, Sandelin A, Wasserman WW, Parcy F, Mathelier A. JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2023). [Pubmed] |
| Notes: | ChIP-seq |
| Length: | 11 |
| Consensus: | TGTTTrCwywg |
| Weblogo: |  |
| PSSM: | P0 A C G T 01 13 2 2 875 T 02 108 7 770 8 G 03 1 7 5 882 T 04 5 7 24 860 T 05 6 3 78 809 T 06 476 12 368 40 r 07 6 807 5 79 C 08 291 106 5 495 w 09 45 368 69 414 y 10 378 9 24 482 w 11 90 125 466 211 g |
| Type: | Heterodimer |
| Binding TFs: | P55317 (Fork head domain, Forkhead N-terminal region, HNF3 C-terminal domain) P55317 |
| Binding Sites: | MA0148.1.1 MA0148.1.10 MA0148.1.11 MA0148.1.12 MA0148.1.13 MA0148.1.14 MA0148.1.15 MA0148.1.16 MA0148.1.17 MA0148.1.18 MA0148.1.19 MA0148.1.2 MA0148.1.20 MA0148.1.3 MA0148.1.4 MA0148.1.5 MA0148.1.6 MA0148.1.7 MA0148.1.8 MA0148.1.9 |
| Publications: | Zhang Y, Liu T, Meyer C.A, Eeckhoute J, Johnson D.S, Bernstein B.E, Nusbaum C, Myers R.M, Brown M, Li W, Liu X.S. Model-based analysis of ChIP-Seq (MACS). Genome biology 9:R137 (2008). [Pubmed] |
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