DNA Binding Motif

						

			
Accessions: MA1946.2 (JASPAR 2024)

			
Names: ETV5::FOXI1
Organisms: Homo sapiens
Libraries: JASPAR 2024 1
1 Rauluseviciute I, Riudavets-Puig R, Blanc-Mathieu R, Castro-Mondragon JA, Ferenc K, Kumar V, Lemma RB, Lucas J, Cheneby J, Baranasic D, Khan A, Fornes O, Gundersen S, Johansen M, Hovig E, Lenhard B, Sandelin A, Wasserman WW, Parcy F, Mathelier A. JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2023). [Pubmed]
Notes: HT-SELEX
Length: 12
Consensus: GtMAACMGGAwG
Weblogo: 
PSSM: P0      A      C      G      T
01     94     34    431      0      G
02     75     50    105    431      t
03    317    113      8      5      M
04    431     15     17      2      A
05    431      0     77      4      A
06      0    431     24     48      C
07    431    165     15      0      M
08     12     46    431      0      G
09     12      2    431     40      G
10    431      1     18     15      A
11    280     22     17    151      w
12     53      6    378      0      G
Type: Heterodimer
Binding TFs: Q12951 (Fork head domain)
Q12951
			
Publications: Ibarra IL, Hollmann NM, Klaus B, Augsten S, Velten B, Hennig J, Zaugg JB. Mechanistic insights into transcription factor cooperativity and its impact on protein-phenotype interactions. Nat Commun 11:124 (2020). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.